As long as you’re not worried about losing ALL your entries (not just imported ones), you can use phpMyAdmin to wipe the appropriate tables clean and start fresh. The following tables can be wiped clean of data: posts, post2cat, and comments. These are the three tables that deal directly with entries.
If you’re really not familiar with phpMyAdmin, I’m more inclined to say drop all the tables and start over. WordPress is a simple install, and with a fresh install the importing should work fine (as long as your data is good).