Plugin enabled for indexing but disabled for search

Hello,

Is it possible to have the plugin enabled to run the index while it lets WP run the default search function?

We have a few portals, and one of them has over 100k posts. To run the whole index it it’ll take about a little more than a whole day by the plugin estimative. The problem is that while the plugin is enabled, the search functions don’t work, bringing empty results, which is a problem.

Is there a quick way to work around this?

Thanks!