[Plugin: Custom Field Template] CFT runs hooks that aren't CFT hooks

custom_field_template_the_content runs do_shortcode() on the $content even if no [cfthooks were found. This is causing shortcodes to be ‘identified’ when they should instead be outputted, for example [category].

I would like custom_field_template_the_content to only do_shortcode()s on CFT’s shortcodes. And/or, I’d like to have an option to disable this the_content hook in the global options.