• Since Just One Category isn’t working on 3.1 I searched for a solution.

    Here you’ll find a workaround to exclude child posts from parent categories. I deactivated Just One Category, made the changes to archive.php as mentioned in the link below and upgraded. Now things are working again.

    Before your category archive loop

    <?php
    $paged = (get_query_var('paged')) ? get_query_var('paged') : 1;
    $current_cat = get_query_var('cat');
    $args=array(
    	'category__in' => array($current_cat),
    	'paged' => $paged
    );
    query_posts($args);
    ?>

    After category loop

    <?php
    set_query_var("cat",$current_cat);
    ?>

    Source: https://www.kristarella.com/2010/03/wordpress-exclude-child-categories-from-category-archives/

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